Journal Description
Chemistry
Chemistry
is a peer-reviewed, open access journal of chemistry, published quarterly online by MDPI.
- Open Access— free for readers, with article processing charges (APC) paid by authors or their institutions.
- High Visibility: indexed within Scopus, ESCI (Web of Science), CAPlus / SciFinder, and other databases.
- Reliable service: rigorous peer review and professional production.
- Rapid Publication: manuscripts are peer-reviewed and a first decision is provided to authors approximately 14.6 days after submission; acceptance to publication is undertaken in 2.9 days (median values for papers published in this journal in the first half of 2023).
- Recognition of Reviewers: reviewers who provide timely, thorough peer-review reports receive vouchers entitling them to a discount on the APC of their next publication in any MDPI journal, in appreciation of the work done.
- Extra benefits: no space constraints, no color charges.
Impact Factor:
2.1 (2022);
5-Year Impact Factor:
2.1 (2022)
Latest Articles
Mechanochemistry through Extrusion: Opportunities for Nanomaterials Design and Catalysis in the Continuous Mode
Chemistry 2023, 5(3), 1760-1769; https://doi.org/10.3390/chemistry5030120 - 08 Aug 2023
Abstract
The potentialities of mechanochemistry trough extrusion have been investigated for the design of nanosized catalysts and their use in C-C bond-forming reactions. The mechanochemical approach proved successful for the synthesis of supported palladium nanoparticles with mean diameter within 6–10 nm, achieved by the
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The potentialities of mechanochemistry trough extrusion have been investigated for the design of nanosized catalysts and their use in C-C bond-forming reactions. The mechanochemical approach proved successful for the synthesis of supported palladium nanoparticles with mean diameter within 6–10 nm, achieved by the reduction of Pd(II) acetate with ethylene glycol, in the absence of any solvent. A mesoporous N-doped carbon derived from chitin as a renewable biopolymer, was used as a support. Thereafter, the resulting nanomaterials were tested as catalysts to implement a second extrusion based-protocol for the Suzuki-Miyaura cross-coupling reaction of iodobenzene and phenylboronic acid. The conversion and the selectivity of the reaction were 81% and >99%, respectively, with a productivity of the desired derivative, biphenyl, of 41 mmol gcat−1 h−1.
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(This article belongs to the Special Issue Green Chemistry—A Themed Issue in Honor of Professor James Clark)
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Ratiometric Detection of Zn2+ Using DNAzyme-Based Bioluminescence Resonance Energy Transfer Sensors
by
, , , , , , , , , and
Chemistry 2023, 5(3), 1745-1759; https://doi.org/10.3390/chemistry5030119 - 08 Aug 2023
Abstract
While fluorescent sensors have been developed for monitoring metal ions in health and diseases, they are limited by the requirement of an excitation light source that can lead to photobleaching and a high autofluorescence background. To address these issues, bioluminescence resonance energy transfer
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While fluorescent sensors have been developed for monitoring metal ions in health and diseases, they are limited by the requirement of an excitation light source that can lead to photobleaching and a high autofluorescence background. To address these issues, bioluminescence resonance energy transfer (BRET)-based protein or small molecule sensors have been developed; however, most of them are not highly selective nor generalizable to different metal ions. Taking advantage of the high selectivity and generalizability of DNAzymes, we report herein DNAzyme-based ratiometric sensors for Zn2+ based on BRET. The 8-17 DNAzyme was labeled with luciferase and Cy3. The proximity between luciferase and Cy3 permitted BRET when coelenterazine, the substrate for luciferase, was introduced. Adding samples containing Zn2+ resulted in a cleavage of the substrate strand, causing dehybridization of the DNAzyme construct, thus increasing the distance between Cy3 and luciferase and changing the BRET signals. Using these sensors, we detected Zn2+ in serum samples and achieved Zn2+ detection with a smartphone camera. Moreover, since the BRET pair is not the component that determines the selectivity of the sensors, this sensing platform has the potential to be adapted for the detection of other metal ions with other metal-dependent DNAzymes.
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(This article belongs to the Special Issue Functional Biomolecule-Based Composites and Nanostructures: Current Developments and Applications—A Themed Issue in Honor of Prof. Dr. Itamar Willner)
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Open AccessArticle
New Functionalized Chitosan with Thio-Thiadiazole Derivative with Enhanced Inhibition of Pathogenic Bacteria, Plant Threatening Fungi, and Improvement of Seed Germination
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, , , , , , and
Chemistry 2023, 5(3), 1722-1744; https://doi.org/10.3390/chemistry5030118 - 08 Aug 2023
Abstract
In this study, a new modified chitosan conjugate (Chito-TZ) was developed via amide coupling between the acid chloride derivative of the methylthio-thidiazole compound and the free primary amino groups of chitosan. The product was characterized using several instrumental investigations, including Fourier-transform infrared spectroscopy
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In this study, a new modified chitosan conjugate (Chito-TZ) was developed via amide coupling between the acid chloride derivative of the methylthio-thidiazole compound and the free primary amino groups of chitosan. The product was characterized using several instrumental investigations, including Fourier-transform infrared spectroscopy (FT-IR), 1H-Nuclear magnetic resonance, X-ray photoelectron spectroscopy (XPS), thermogravimetric analysis (TGA), and X-ray diffraction (XRD). XRD indicated that the crystalline pattern of chitosan was interrupted after chemical modification with the thiadiazole derivative. Broido’s model was used to determine the thermal activation energy Ea, and the results showed that the Ea for the first decomposition region of Chito-TZ is 24.70 KJ mol−1 lower than that required for chitosan (95.57 KJ mol−1), indicating the accelerating effect of the thiadiazole derivative on the thermal decomposition of Chito-TZ. The modified chitosan showed better antibacterial and antifungal activities than the non-modified chitosan; except for seed germination, chitosan was better. The Chito-TZ showed a low MIC value (25–50 µg mL−1) compared to Chito (50–100 µg mL−1). Moreover, the maximum inhibition percentages for plant-pathogenic fungi, Aspergillus niger, Fusarium oxysporum, and Fusarium solani, were attained at a concentration of 300 µg mL−1 with values of 35.4 ± 0.9–39.4 ± 1.7% for Chito and 45.2 ± 1.6–52.1 ± 1.3% for Chito-TZ. The highest germination percentages (%) of broad bean, shoot and root length and weight, and seed vigor index were obtained after Chito treatment with a concentration of 200 µg mL−1 compared to Chito-TZ.
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(This article belongs to the Section Biological and Natural Products)
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Open AccessCorrection
Correction: Kurniawan et al. Vapor-Phase Oxidant-Free Dehydrogenation of 2,3- and 1,4-Butanediol over Cu/SiO2 Catalyst Prepared by Crown-Ether-Assisted Impregnation. Chemistry 2023, 5, 406–421
Chemistry 2023, 5(3), 1719-1721; https://doi.org/10.3390/chemistry5030117 - 07 Aug 2023
Abstract
In the published article “Vapor-Phase Oxidant-Free Dehydrogenation of 2,3- and 1,4-Butanediol over Cu/SiO2 Catalyst Prepared by Crown-Ether-Assisted Impregnation“ [...]
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(This article belongs to the Special Issue Heterogeneous Catalysis — A Themed Issue in Honor of Prof. Dr. Avelino Corma)
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Open AccessReview
Peptide-Based Vectors for Gene Delivery
by
and
Chemistry 2023, 5(3), 1696-1718; https://doi.org/10.3390/chemistry5030116 - 05 Aug 2023
Abstract
Gene therapy is the ultimate therapeutic technology for diseases related to gene abnormality. However, the use of DNA alone has serious problems, such as poor stability and difficulty in entering target cells. The development of a safe and efficient gene delivery system is
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Gene therapy is the ultimate therapeutic technology for diseases related to gene abnormality. However, the use of DNA alone has serious problems, such as poor stability and difficulty in entering target cells. The development of a safe and efficient gene delivery system is the cornerstone of gene therapy. Of particular interest, multifunctional peptides are rationally designed as non-viral vectors for efficient gene delivery. As components of gene delivery vectors, these peptides play critically important roles in skeleton construction, the implementation of targeting strategies, cell membrane penetration, endosome rupture, and nuclear transport. In recent years, the research of functional peptide-based gene delivery vectors has made important progress in improving transfection efficiency. The latest research progress and future development direction of peptide-based gene delivery vectors are reviewed in this paper.
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(This article belongs to the Special Issue Functional Biomolecule-Based Composites and Nanostructures: Current Developments and Applications—A Themed Issue in Honor of Prof. Dr. Itamar Willner)
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Open AccessArticle
Rare Nuclearities and Unprecedented Structural Motifs in Manganese Cluster Chemistry from the Combined Use of Di-2-Pyridyl Ketone with Selected Diols
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, , , , , , and
Chemistry 2023, 5(3), 1681-1695; https://doi.org/10.3390/chemistry5030115 - 01 Aug 2023
Abstract
The combined use of di-2-pyridyl ketone ((py)2CO) with various diols in Mn cluster chemistry has afforded five new compounds, namely, [Mn11O2(OH)2{(py)2CO2}5(pd)(MeCO2)3(N3)3(NO
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The combined use of di-2-pyridyl ketone ((py)2CO) with various diols in Mn cluster chemistry has afforded five new compounds, namely, [Mn11O2(OH)2{(py)2CO2}5(pd)(MeCO2)3(N3)3(NO3)2(DMF)4](NO3)∙2DMF∙H2O (1∙2DMF∙H2O), [Mn11O2(OH)2{(py)2CO2}5(mpd)(MeCO2)3(N3)3(NO3)2(DMF)4](NO3) (2), [Mn12O4(OH)2{(py)2CO2}4(mpd)2(Me3CCO2)4(NO3)4(H2O)6](NO3)2∙2MeCN (3∙2MeCN), [Mn4(OMe)2{(py)2C(OMe)O}2(2-hp)2(NO3)2(DMF)2] (4), and [Mn7{(py)2CO2}4(2-hp)4(NO3)2(DMF)2](ClO4)∙DMF (5∙DMF) ((py)2CO22− and (py)2C(OMe)O− = gem-diol and hemiketal derivatives of di-2-pyridyl ketone, pdH2 = 1,3-propanediol, mpdH2 = 2-metly-1,3-propanediol, 2-hpH2 = 2-(hydroxymethyl)phenol). Complexes 1 and 2 are isostructural, possessing an asymmetric [MnIII5MnII6(μ4-O)(μ3-O)(μ3-OH)(μ-OH)(μ3-OR)2(μ-OR)10(μ-N3)]8+ core. Compound 3 is based on a multilayer [MnIII8MnII4(μ4-O)2(μ3-O)2(μ3-OH)2(μ-OR)12]10+ core, while complex 4 comprises a defective dicubane core. The crystal structure of 5 reveals that it is based on an unusual non-planar [MnIII5MnII2(μ-OR)12]7+ core with a serpentine-like topology. Direct current (dc) magnetic susceptibility studies revealed the presence of dominant antiferromagnetic exchange interactions in complex 3, while ferromagnetic coupling between the Mn ions was detected in the case of compound 5. Fitting of the magnetic data for complex 4 revealed weak antiferromagnetic interactions along the peripheral MnII∙∙∙MnIII ions (Jwb = −0.33 (1) cm−1) and ferromagnetic interactions between the central MnIII∙∙∙MnIII ions (Jbb = 6.28 (1) cm−1).
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(This article belongs to the Special Issue Coordination Chemistry: Current Developments and Future Perspectives — A Themed Issue in Honor of Professor Spyros P. Perlepes on the Occasion of His 70th Birthday)
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Aptamer-Based Immune Drug Systems (AptIDCs) Potentiating Cancer Immunotherapy
Chemistry 2023, 5(3), 1656-1680; https://doi.org/10.3390/chemistry5030114 - 30 Jul 2023
Abstract
Aptamers are artificial oligonucleotides with excellent molecule-targeting ability. Compared with monoclonal antibodies, aptamers have the advantages of low cost, no batch effect, and negligible immunogenicity, making them promising candidates for cancer immunotherapy. To date, a series of aptamer agonists/antagonists have been discovered and
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Aptamers are artificial oligonucleotides with excellent molecule-targeting ability. Compared with monoclonal antibodies, aptamers have the advantages of low cost, no batch effect, and negligible immunogenicity, making them promising candidates for cancer immunotherapy. To date, a series of aptamer agonists/antagonists have been discovered and directly used to activate immune response, such as immune checkpoint blockade, immune costimulation, and cytokine regulation. By incorporating both tumor- and immune cell-targeting aptamers, multivalent bispecific aptamers were designed to pursue high tumor affinity and enhanced immune efficacy. More importantly, benefiting from feasible chemical modification and programmability, aptamers can be engineered with diverse nanomaterials (e.g., liposomes, hydrogels) and even living immune cells (e.g., NK cells, T cells). These aptamer-based assemblies exhibit powerful capabilities in targeted cargo delivery, regulation of cell–cell interactions, tumor immunogenicity activation, tumor microenvironment remodeling, etc., holding huge potential in boosting immunotherapeutic efficacy. In this review, we focus on the recent advances in aptamer-based immune drug systems (AptIDCs) and highlight their advantages in cancer immunotherapy. The current challenges and future prospects of this field are also pointed out in this paper.
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(This article belongs to the Special Issue Functional Biomolecule-Based Composites and Nanostructures: Current Developments and Applications—A Themed Issue in Honor of Prof. Dr. Itamar Willner)
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Open AccessArticle
Hydrothermally Synthesized Hydroxyapatite-Silica Composites with Enhanced Mechanical Properties for Bone Graft Applications
by
, , , , , , , and
Chemistry 2023, 5(3), 1645-1655; https://doi.org/10.3390/chemistry5030113 - 28 Jul 2023
Abstract
The demand for synthetic bone grafts has increased in recent years. Hydroxyapatite (HA) is one of the highly suitable candidates as a bone graft material due to its excellent biocompatibility and high osteoconductive properties with low toxicity. HA has disadvantageous mechanical strength showing
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The demand for synthetic bone grafts has increased in recent years. Hydroxyapatite (HA) is one of the highly suitable candidates as a bone graft material due to its excellent biocompatibility and high osteoconductive properties with low toxicity. HA has disadvantageous mechanical strength showing relatively fragile and brittle behavior due to its high hygroscopic properties. This leads to improper mechanical properties for such grafting applications. Therefore, HA should be combined with another material with similar biocompatibility and high hardness, such as SiO2. In this work, HA/SiO2 (HAS) composite material was prepared via a hydrothermal method to obtain the high purities of HA with a particle size of approximately 35 nm and around 50% crystallinity. It was found that the addition of SiO2 stimulated the composite system by forming an orthosilicic acid complex that can reduce the overall solution’s pH, thus contributing to the integrity and stability of the HAS composite. Therefore, higher SiO2 contents in the HAS composite can enhance its mechanical stability when immersed in simulated body fluid (SBF). Our work demonstrated that HAS can highly improve HA material’s hardness and mechanical stability under immersion of SBF. The Vickers test showed that the 0.05 GPa hardness in 10% SiO2 increased to 0.35 GPa hardness with the addition of 20% SiO2. The crystal structures of HAS were analyzed using X-ray diffraction, and the morphology of the HAS composites was observed under electron microscopy.
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(This article belongs to the Special Issue Hybrid Compounds Tailoring at the Nanoscale for Biomedical Applications)
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Construction of an ATP-Activated Y-Shape DNA Probe for Smart miRNA Imaging in Living Cells
Chemistry 2023, 5(3), 1634-1644; https://doi.org/10.3390/chemistry5030112 - 27 Jul 2023
Abstract
A stringent DNA probe to profile microRNA (miRNA) expression within a specific cell remains a key challenge in biology. To address this issue, an intracellular ATP-activated Y-DNA probe for accurate imaging of miRNA in living cells was designed. Y-DNA was based on the
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A stringent DNA probe to profile microRNA (miRNA) expression within a specific cell remains a key challenge in biology. To address this issue, an intracellular ATP-activated Y-DNA probe for accurate imaging of miRNA in living cells was designed. Y-DNA was based on the fabrication of tripartite function modules, which consisted of a folate (FA)-modified targeting module, an ATP aptamer-sealed driver, and a miRNA sensing module. The Y-DNA probe could be specifically activated by ATP after it efficiently internalized into FA-receptor-overexpressed cells based on caveolar-mediated endocytosis, leading to the activation of the miRNA sensing module. The activated Y-DNA probe allowed for the imaging of miRNA in living cells with high sensitivity. The design of the ATP-activated Y-DNA sensor opens the door for bioorthogonal miRNA imaging and promotes the development of various responsive DNA molecular probes with enhanced anti-interference ability for clinical diagnosis.
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(This article belongs to the Special Issue Functional Biomolecule-Based Composites and Nanostructures: Current Developments and Applications—A Themed Issue in Honor of Prof. Dr. Itamar Willner)
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Constructing a Triangle Ensemble of Pt Clusters for Enhanced Direct-Pathway Electrocatalysis of Formic Acid Oxidation
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, , , , , , and
Chemistry 2023, 5(3), 1621-1633; https://doi.org/10.3390/chemistry5030111 - 26 Jul 2023
Abstract
The pursuit of operational advancements in direct formic acid fuel cells (DFAFCs) necessitates the development of high-performance platinum (Pt)-based catalysts for formic acid electrooxidation (FAOR). However, FAOR on Pt-based catalysts follows a dual pathway mechanism, in which the direct pathway is a preferred
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The pursuit of operational advancements in direct formic acid fuel cells (DFAFCs) necessitates the development of high-performance platinum (Pt)-based catalysts for formic acid electrooxidation (FAOR). However, FAOR on Pt-based catalysts follows a dual pathway mechanism, in which the direct pathway is a preferred route due to its efficient dehydrogenation process. Conversely, the indirect pathway results in the generation of adsorbed CO species, a process that deleteriously poisons the active sites of the catalyst, with CO species only being oxidizable at higher potentials, causing a significant compromise in catalyst performance. Herein, we have successfully synthesized Pt-C3N4@CNT, where three Pt clusters are precisely dispersed in a triplet form within the C3N4 by virtue of the unique structure of C3N4. The mass activity for the direct pathway (0.44 V) delivered a current density of 1.91 A , while the indirect pathway (0.86 V) had no obvious oxidation peak. The selectivity of Pt-C3N4@CNT catalysts for the direct pathway of FAOR was improved due to the special structure of C3N4, which facilitates the dispersion of Pt tri-atoms in the structure and the electronic interaction with Pt. In this study, we provide a new strategy for the development of highly active and selective catalysts for DFAFCs.
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(This article belongs to the Special Issue Functional Biomolecule-Based Composites and Nanostructures: Current Developments and Applications—A Themed Issue in Honor of Prof. Dr. Itamar Willner)
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Structural and Magnetic Analysis of a Family of Structurally Related Iron(III)-Oxo Clusters of Metal Nuclearity Fe8, Fe12Ca4, and Fe12La4
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, , , , and
Chemistry 2023, 5(3), 1599-1620; https://doi.org/10.3390/chemistry5030110 - 24 Jul 2023
Abstract
The synthesis, crystal structure, and magnetic characterization are reported for three new structurally related iron(III) compounds (NHEt3)[Fe8O5(OH)5(O2PPh2)10] (1), [Fe12 Ca4O10(O2CPh)
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The synthesis, crystal structure, and magnetic characterization are reported for three new structurally related iron(III) compounds (NHEt3)[Fe8O5(OH)5(O2PPh2)10] (1), [Fe12 Ca4O10(O2CPh)10(hmp)4] (2), and [Fe12La4O10(OH)4(tbb)24] (3), where hmpH is 2-(hydroxymethyl)pyridine and tbbH is 4-tBu-benzoic acid. 1 was obtained from the reaction of Fe(NO3)3·9H2O, diphenylphosphinic acid (Ph2PO2H), and NEt3 in a 1:4:16 molar ratio in MeCN at 50 °C; 2 was obtained from the reaction of [Fe3O(O2CPh)6(H2O)3](NO3), Ca(NO3)2, and NEt3 in a 1:1:4:2 ratio at 130 °C; and 3 was obtained from the reaction of Fe(NO3)3·9H2O, La(NO3)3·6H2O, 4-tBu-benzoic acid, and NEt3 in a 1:1:4:4 ratio in PhCN at 140 °C. The core of 1 consists of two {Fe4(µ3-O)2}8+ butterfly units stacked on top of each other and bridged by O2− and HO− ions. The cores of 2 and 3 also contain two stacked butterfly units, plus four additional Fe atoms, two at each end, and four M atoms (M = Ca2+ (2); La3+ (3)) on the sides. Variable-temperature (T) and solid-state dc and ac magnetization (M) data collected in the 1.8–300 K range revealed that 1 has an S = 0 ground state, 2 has a χMT value at low T consistent with the central Fe8 in a local S = 0 ground state and the two Fe3+ ions in each end-pair to be non-interacting, whereas 3 has a χMT value at low T consistent with these end-pairs each being ferromagnetically coupled with S = 5 ground states, plus intermolecular ferromagnetic interactions. These conclusions were reached from complementing the experimental studies with the calculation of the various Fe2 pairwise Jij exchange couplings by DFT computations and by using a magnetostructural correlation (MSC) for polynuclear Fe3+/O complexes, as well as a structural analysis of the intermolecular contacts in the crystal packing of 3.
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(This article belongs to the Special Issue Coordination Chemistry: Current Developments and Future Perspectives — A Themed Issue in Honor of Professor Spyros P. Perlepes on the Occasion of His 70th Birthday)
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Low-Temperature Properties of the Sodium-Ion Electrolytes Based on EC-DEC, EC-DMC, and EC-DME Binary Solvents
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, , , and
Chemistry 2023, 5(3), 1588-1598; https://doi.org/10.3390/chemistry5030109 - 23 Jul 2023
Abstract
Sodium-ion batteries are a promising class of secondary power sources that can replace some of the lithium-ion, lead–acid, and other types of batteries in large-scale applications. One of the critical parameters for their potential use is high efficiency in a wide temperature range,
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Sodium-ion batteries are a promising class of secondary power sources that can replace some of the lithium-ion, lead–acid, and other types of batteries in large-scale applications. One of the critical parameters for their potential use is high efficiency in a wide temperature range, particularly below 0 °C. This article analyzes the phase equilibria and electrochemical properties of sodium-ion battery electrolytes that are based on NaPF6 solutions in solvent mixtures of ethylene carbonate and diethyl carbonate (EC:DEC), dimethyl carbonate (EC:DMC), and 1,2-dimethoxyethane (EC:DME). All studied electrolytes demonstrate a decrease in conductivity at lower temperatures and transition to a quasi-solid state resembling “wet snow” at certain temperatures: EC:DEC at −8 °C, EC:DMC at −13 °C, and EC:DME at −21 °C for 1 M NaPF6 solutions. This phase transition affects their conductivity to a different degree. The impact is minimal in the case of EC:DEC, although it partially freezes at a higher temperature than other electrolytes. The EC:DMC-based electrolyte demonstrates the best efficiency at temperatures down to −20 °C. However, upon further cooling, 1 M NaPF6 in EC:DEC retains a higher conductivity and lower resistivity in symmetrical Na3V2(PO4)3-based cells. The temperature range from −20 to −40 °C is characterized by the strongest deterioration in the electrochemical properties of electrolytes: for 1 M NaPF6 in EC:DMC, the charge transfer resistance increased 36 times, and for 1 M NaPF6 in EC:DME, 450 times. For 1 M NaPF6 in EC:DEC, the growth of this parameter is much more modest and amounts to only 1.7 times. This allows us to consider the EC:DEC-based electrolyte as a promising basis for the further development of low-temperature sodium-ion batteries.
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(This article belongs to the Section Electrochemistry)
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Coupling 2-Aminopurine with DNA Copper Nanoparticles as a Rapid and Enzyme-Free System for Operating DNA Contrary Logic Pairs
Chemistry 2023, 5(3), 1577-1587; https://doi.org/10.3390/chemistry5030108 - 23 Jul 2023
Abstract
Exploring affordable and efficient platform for innovative DNA computing is of great significance. Herein, by coupling 2-aminopurine (2AP) with DNA copper nanoparticles (CuNPs) as two universal opposite outputs, we, for the first time, fabricated a rapid and enzyme-free system for operating DNA contrary
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Exploring affordable and efficient platform for innovative DNA computing is of great significance. Herein, by coupling 2-aminopurine (2AP) with DNA copper nanoparticles (CuNPs) as two universal opposite outputs, we, for the first time, fabricated a rapid and enzyme-free system for operating DNA contrary logic pairs (D-CLPs). Notably, derived from the rapid and concomitant response of both fluorescent probes, different D-CLPs can be achieved via a “double-results-half-efforts” manner in less than 20 min with low-cost. Moreover, based on the same system, the smart ratiometric analysis of target DNA was realized by employing the high reliability and accuracy of D-CLPs, providing a robust and typical paradigm for the exploration of smart nucleic acid sensors.
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(This article belongs to the Special Issue Functional Biomolecule-Based Composites and Nanostructures: Current Developments and Applications—A Themed Issue in Honor of Prof. Dr. Itamar Willner)
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Exploring the Effect of Sn Addition to Supported Au Nanoparticles on Reducible/Non-Reducible Metal Oxides Supports for Alkane Oxidation
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, , , , , and
Chemistry 2023, 5(3), 1560-1576; https://doi.org/10.3390/chemistry5030107 - 21 Jul 2023
Abstract
Acetone-stabilized Au- and Sn-solvated metal atoms (SMAs) were used as to obtain Au- and AuSn-supported catalysts by simple impregnation on a reducible (TiO2) and a non-reducible (Al2O3) metal-oxide. Their catalytic behaviour was investigated for cyclohexane oxidation to
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Acetone-stabilized Au- and Sn-solvated metal atoms (SMAs) were used as to obtain Au- and AuSn-supported catalysts by simple impregnation on a reducible (TiO2) and a non-reducible (Al2O3) metal-oxide. Their catalytic behaviour was investigated for cyclohexane oxidation to cyclohexanol and cyclohexanone (KA oil), and their morphological and physical properties were studied by TEM, STEM-EDS and 119Sn-Mössbauer spectroscopy. The catalytic results firstly demonstrated that the bare supports played a role on the reaction mechanism, slowing down the formation of the oxidation products and directing the radical formation. Hereinafter, the comparison between the monometallic Au-supported catalysts and the corresponding bimetallic Au-Sn catalysts allowed for the understanding of the potential role of Sn. 119Sn-Mössbauer characterization analyses showed the presence of SnO2, which was recognized to favour the electrons’ exchange to form radicals, interacting with oxygen. Such interaction, in particular, could be favoured by the co-presence of Au. Moreover, the same metal composition on the catalyst surface resulted in a different catalytic behaviour depending on the support.
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(This article belongs to the Special Issue Heterogeneous Catalysis — A Themed Issue in Honor of Prof. Dr. Avelino Corma)
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DNA-Based Mechanical Sensors for Cell Applications
Chemistry 2023, 5(3), 1546-1559; https://doi.org/10.3390/chemistry5030106 - 19 Jul 2023
Abstract
Cells constantly experience mechanical forces during growth and development. Increasing evidence suggests that mechanical forces can regulate cellular processes such as proliferation, migration, and differentiation. Therefore, developing new tools to measure and manipulate cellular mechanical forces is essential. DNA nanostructures, due to their
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Cells constantly experience mechanical forces during growth and development. Increasing evidence suggests that mechanical forces can regulate cellular processes such as proliferation, migration, and differentiation. Therefore, developing new tools to measure and manipulate cellular mechanical forces is essential. DNA nanostructures, due to their simple design and high programmability, have been utilized to create various mechanical sensors and have become a key tool for studying mechanical information in both cellular and non-cellular systems. In this article, we review the development of DNA-based mechanical sensors and their applications in measuring mechanical forces in the extracellular matrix and cell–cell interactions and summarize the latest advances in monitoring and manipulating cellular morphology and function. We hope that this review can provide insights for the development of new mechanical nanodevices.
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(This article belongs to the Special Issue Functional Biomolecule-Based Composites and Nanostructures: Current Developments and Applications—A Themed Issue in Honor of Prof. Dr. Itamar Willner)
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Open AccessCommunication
Exploring the Potential Energy Surface of Medium-Sized Aromatic Polycyclic Systems with Embedded Planar Tetracoordinate Carbons: A Guided Approach
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, , , , and
Chemistry 2023, 5(3), 1535-1545; https://doi.org/10.3390/chemistry5030105 - 11 Jul 2023
Abstract
This study scrutinizes the complexities of designing and exploring the potential energy surfaces of systems containing more than twenty atoms with planar tetracoordinate carbons (ptCs). To tackle this issue, we utilized an established design rule to design a Naphtho [1,2-b:3,4-b′:5,6-b″:7,8-b′′′]tetrathiophene derivative computationally. This
[...] Read more.
This study scrutinizes the complexities of designing and exploring the potential energy surfaces of systems containing more than twenty atoms with planar tetracoordinate carbons (ptCs). To tackle this issue, we utilized an established design rule to design a Naphtho [1,2-b:3,4-b′:5,6-b″:7,8-b′′′]tetrathiophene derivative computationally. This process began with substituting S atoms with CH− units, then replacing three sequential protons with two Si2+ units in the resultant polycyclic aromatic hydrocarbon polyanion. Despite not representing the global minimum, the newly designed Si8C22 system with four ptCs provided valuable insights into strategic design and potential energy surface exploration. Our results underscore the importance of employing adequate methodologies to confirm the stability of newly designed molecular structures containing planar hypercoordinate carbons.
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(This article belongs to the Section Theoretical Chemistry)
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Catalytic Performances of Co/TiO2 Catalysts in the Oxidative Dehydrogenation of Ethane to Ethylene: Effect of CoTiO3 and Co2TiO4 Phase Formation
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, , , , , , and
Chemistry 2023, 5(3), 1518-1534; https://doi.org/10.3390/chemistry5030104 - 06 Jul 2023
Abstract
Co/TiO2 catalysts with different cobalt loadings (3.8, 7.5 and 15 wt%) were prepared by impregnation method of Co(NO3)2 6H2O over titania. Samples containing Co(NO3)2·6H2O and TiO2 in stoichiometric proportions in
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Co/TiO2 catalysts with different cobalt loadings (3.8, 7.5 and 15 wt%) were prepared by impregnation method of Co(NO3)2 6H2O over titania. Samples containing Co(NO3)2·6H2O and TiO2 in stoichiometric proportions in order to obtain CoTiO3 and Co2 TiO4 phases were also synthesized. The effect of the calcination treatment at two different temperatures, 550 and 1150 °C, was investigated. Characterizations by several techniques, such as XRD, UV–vis–NIR, DRS, Raman and XPS, were carried out. XRD showed the coexistence of three phases: CoTiO3; Co2TiO4 and Co3O4 after calcination at 550 °C, while calcination at high temperature (1150 °C) led to single-phase systems (CoTiO3 or Co2TiO4). Diffuse reflection and XPS spectroscopy showed that divalent cobalt occupies octahedral sites in the ilmenite phase, and both tetrahedral and octahedral sites in the spinel phase. The catalytic performances of the prepared catalysts were evaluated in the oxidative dehydrogenation reaction (ODH) of ethane to ethylene, as a function of the Co content for Co/TiO2 catalysts and as a function of the calcination temperatures for the CoTiO3 and Co2TiO4 phases. Co(7.5)/TiO2 was the most active, although the conversion of ethane decreased in the first 150 min of the reaction, reaching values comparable to those of Co2TiO4 and CoTiO3; however, Co(7.5)/TiO2 was confirmed as having the best selectivity to ethylene in comparison with the bulk phases, CoTiO3 and Co2TiO4. The influence of the reaction mixture composition, specifically the presence of water, at different percentages, was investigated. There is a decrease in the overall ethane conversion and an increase in the ethylene selectivity when the percentage of water increases. This behavior can likely be attributed to an increase in the surface concentration of hydroxyl species (OH), resulting in heightened surface acidity.
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(This article belongs to the Special Issue Heterogeneous Catalysis — A Themed Issue in Honor of Prof. Dr. Avelino Corma)
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Synthesis of the Bipyridine-Type Ligand 3-(2-Pyridyl)-5,6-diphenyl-1,2,4-triazine and Structural Elucidation of Its Cu(I) and Ag(I) Complexes
Chemistry 2023, 5(3), 1508-1517; https://doi.org/10.3390/chemistry5030103 - 05 Jul 2023
Abstract
The synthesis of a substituted diimine with a bipydirine-type backbone, (3-(2-pyridyl)-5,6-diphenyl-1,2,4-triazine, L) and its coordination towards Cu(I) and Ag(I) is studied in the presence of diphosphine ligand bis(diphenylphosphino)methane, dppm. The metal complexes are characterized by IR, 1H, and 13C NMR and
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The synthesis of a substituted diimine with a bipydirine-type backbone, (3-(2-pyridyl)-5,6-diphenyl-1,2,4-triazine, L) and its coordination towards Cu(I) and Ag(I) is studied in the presence of diphosphine ligand bis(diphenylphosphino)methane, dppm. The metal complexes are characterized by IR, 1H, and 13C NMR and single crystal X ray diffraction studies. They are dinuclear, as they are held by diphosphine bridges between the tetrahedral metal centers, forming eight-membered ring with the participation of the bridging diphosphinomethane ligands. Within each ring, the planar orientations of M2P2 and of all four P atoms are realized. Solid state excitation spectra are dominated by metal-to-ligand charge transfer bands (MLCT), while geometry relaxation permits only low-intensity emission for the copper compound.
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(This article belongs to the Special Issue Coordination Chemistry: Current Developments and Future Perspectives — A Themed Issue in Honor of Professor Spyros P. Perlepes on the Occasion of His 70th Birthday)
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Photocatalytic Duplex-Based DNAzymes Switched by an Abasic Site
Chemistry 2023, 5(3), 1497-1507; https://doi.org/10.3390/chemistry5030102 - 28 Jun 2023
Abstract
DNAzymes have attracted increasing interest in developments of gene tools, therapies, and biosensors. Among them, G-quadruplexes are widely used as the key structure elements of DNAzymes to activate the catalytic competency of specific cofactors, such as hemin, but there is a great demand
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DNAzymes have attracted increasing interest in developments of gene tools, therapies, and biosensors. Among them, G-quadruplexes are widely used as the key structure elements of DNAzymes to activate the catalytic competency of specific cofactors, such as hemin, but there is a great demand to diversify DNAzymes using other more straightforward DNA structures such as fully matched duplex (FM-DNA). However, the perfect base pairs in duplex limit the DNAzyme activity. In this work, a photocatalytic DNAzyme was developed by introducing an abasic site (AP site) into duplex (AP-DNA) to switch its photocatalytic activity. Palmatine (PAL), a photosensitizer from natural isoquinoline alkaloids, served as a cofactor of the DNAzyme by binding at the AP site. The AP site provides a less polarized environment to favor the PAL fluorescence. As a result, dissolved oxygen was converted into singlet oxygen (1O2) via energy transfer from the excited PAL. The oxidation of substrates by the in situ photogenerated 1O2 served as a readout for the DNAzyme. In addition, the duplex-based DNAzyme was engineered from FM-DNA by the cascade uracil-DNA glycosylase to generate AP-DNA. Our work provides a new way to construct duplex-based DNAzymes.
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(This article belongs to the Special Issue Functional Biomolecule-Based Composites and Nanostructures: Current Developments and Applications—A Themed Issue in Honor of Prof. Dr. Itamar Willner)
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Synthesis of Selenium-Based Small Molecules Inspired by CNS-Targeting Psychotropic Drugs and Mediators
by
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Chemistry 2023, 5(3), 1488-1496; https://doi.org/10.3390/chemistry5030101 - 27 Jun 2023
Abstract
Due to its endogenously high oxygen consumption, the central nervous system (CNS) is vulnerable to oxidative stress conditions. Notably, the activity of several CNS-targeting compounds, such as antidepressant and hypnotic drugs, or endogenous mediators, such as melatonin, is indeed linked to their ability
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Due to its endogenously high oxygen consumption, the central nervous system (CNS) is vulnerable to oxidative stress conditions. Notably, the activity of several CNS-targeting compounds, such as antidepressant and hypnotic drugs, or endogenous mediators, such as melatonin, is indeed linked to their ability of mitigating oxidative stress. In this work, we report the synthesis of two organoselenium compounds of which the structure was inspired by CNS-targeting psychotropic drugs (zolpidem and fluoxetine) and an endogenous mediator (melatonin). The molecules were designed with the aim of combining the ROS-scavenging properties, which were already assessed for the parent compounds, with a secondary antioxidant action, a glutathione peroxidase (GPx) mimic role empowered by the presence of selenium. The compounds were obtained through a facile three-step synthesis and were predicted by computational tools to passively permeate through the blood–brain barrier and to efficiently bind to the GABA A receptor, the macromolecular target of zolpidem. Of note, the designed synthetic pathway enables the production of several other derivatives through minor modifications of the scheme, paving the way for structure–activity relationship studies.
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(This article belongs to the Section Medicinal Chemistry)
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